Tiamat (Windows) – Graphical user interface program for the design of DNA nanostructures and sequences.

Tiamat User Manual– User manual for Tiamat.

Tiamat 2.exe – New version of Tiamat with RNA design, user-defined constraints, and oxDNA-friendly export.

Example files

Double crossover (DAE) tile (.dna)– DNA model file.

4×4 tile (.dna)– DNA model file.

Four-helix tile (.dna)– DNA model file.

Tetrahedron (.dna)– DNA model file.

Rectangular origami (.dna)– DNA model file.

4×4 tile animation (.asf)– Cartoon animation using Tiamat.

Three-helix bundle animation (.asf)– Cartoon animation using Tiamat.

Tetrahedron animation (.asf)– Cartoon animation using Tiamat.

Design tools

caDNAno

MagicDNA

Oligo Analyzer

NUPACK

TALOS

PERDIX

DNAxis

Simulation tools

oxDNA

CanDo

Visualization tools

oxView

ChimeraX

Fluorescence SpectraViewer

Biodesign Resources

Biodesign Institute – Nature-inspired science & innovation

Biodesign Center for Molecular Design and Biomimetics – Our Center

ASU Biodesign YouTube – Media & outreach

SMS Resources

SMS Home – Main portal

SMS Resources Directory – Tools & forms

Research in SMS – Labs & themes

Facilities & Instrumentation – Shared equipment

Contact SMS – Admin & offices